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Free, publicly-accessible full text available November 4, 2026
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Free, publicly-accessible full text available August 3, 2026
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Spatial-temporal graphs are widely used in a variety of real-world applications. Spatial-Temporal Graph Neural Networks (STGNNs) have emerged as a powerful tool to extract meaningful insights from this data. However, in real-world applications, most nodes may not possess any available temporal data during training. For example, the pandemic dynamics of most cities on a geographical graph may not be available due to the asynchronous nature of outbreaks. Such a phenomenon disagrees with the training requirements of most existing spatial-temporal forecasting methods, which jeopardizes their effectiveness and thus blocks broader deployment. In this paper, we propose to formulate a novel problem of inductive forecasting with limited training data. In particular, given a spatial-temporal graph, we aim to learn a spatial-temporal forecasting model that can be easily generalized onto those nodes without any available temporal training data. To handle this problem, we propose a principled framework named ST-FiT. ST-FiT consists of two key learning components: temporal data augmentation and spatial graph topology learning. With such a design, ST-FiT can be used on top of any existing STGNNs to achieve superior performance on the nodes without training data. Extensive experiments verify the effectiveness of ST-FiT in multiple key perspectives.more » « lessFree, publicly-accessible full text available April 11, 2026
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Multi-modal learning by means of leveraging both 2D graph and 3D point cloud information has become a prevalent method to improve model performance in molecular property prediction. However, many recent techniques focus on specific pre-training tasks such as contrastive learning, feature blending, and atom/subgraph masking in order to learn multi-modality even though design of model architecture is also impactful for both pre-training and downstream task performance. Relying on pre-training tasks to align 2D and 3D modalities lacks direct interaction which may be more effective in multimodal learning. In this work, we propose MolInteract, which takes a simple yet effective architecture-focused approach to multimodal molecule learning which addresses these challenges. MolInteract leverages an interaction layer for fusing 2D and 3D information and fostering cross-modal alignment, showing strong results using even the simplest pre-training methods such as predicting features of the 3D point cloud and 2D graph. MolInteract exceeds state-of-the-art multimodal pre-training techniques and architectures on various downstream 2D and 3D molecule property prediction benchmark tasks.more » « lessFree, publicly-accessible full text available June 10, 2026
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Free, publicly-accessible full text available August 3, 2026
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Functional Magnetic Resonance Image (fMRI) is commonly employed to study human brain activity, since it offers insight into the relationship between functional fluctuations and human behavior. To enhance analysis and comprehension of brain activity, Graph Neural Networks (GNNs) have been widely applied to the analysis of functional connectivities (FC) derived from fMRI data, due to their ability to capture the synergistic interactions among brain regions. However, in the human brain, performing complex tasks typically involves the activation of certain pathways, which could be represented as paths across graphs. As such, conventional GNNs struggle to learn from these pathways due to the long-range dependencies of multiple pathways. To address these challenges, we introduce a novel framework BrainMAP to learn multiple pathways in brain networks. BrainMAP leverages sequential models to identify long-range correlations among sequentialized brain regions and incorporates an aggregation module based on Mixture of Experts (MoE) to learn from multiple pathways. Our comprehensive experiments highlight BrainMAP's superior performance. Furthermore, our framework enables explanatory analyses of crucial brain regions involved in tasks.more » « lessFree, publicly-accessible full text available April 11, 2026
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Graph Neural Networks (GNNs) have been increasingly deployed in a plethora of applications. However, the graph data used for training may contain sensitive personal information of the involved individuals. Once trained, GNNs typically encode such information in their learnable parameters. As a consequence, privacy leakage may happen when the trained GNNs are deployed and exposed to potential attackers. Facing such a threat, machine unlearning for GNNs has become an emerging technique that aims to remove certain personal information from a trained GNN. Among these techniques, certified unlearning stands out, as it provides a solid theoretical guarantee of the information removal effectiveness. Nevertheless, most of the existing certified unlearning methods for GNNs are only designed to handle node and edge unlearning requests. Meanwhile, these approaches are usually tailored for either a specific design of GNN or a specially designed training objective. These disadvantages significantly jeopardize their flexibility. In this paper, we propose a principled framework named IDEA to achieve flexible and certified unlearning for GNNs. Specifically, we first instantiate four types of unlearning requests on graphs, and then we propose an approximation approach to flexibly handle these unlearning requests over diverse GNNs. We further provide theoretical guarantee of the effectiveness for the proposed approach as a certification. Different from existing alternatives, IDEA is not designed for any specific GNNs or optimization objectives to perform certified unlearning, and thus can be easily generalized. Extensive experiments on real-world datasets demonstrate the superiority of IDEA in multiple key perspectives.more » « less
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Graph-structured data is ubiquitous among a plethora of real-world applications. However, as graph learning algorithms have been increasingly deployed to help decision-making, there has been rising societal concern in the bias these algorithms may exhibit. In certain high-stake decision-making scenarios, the decisions made may be life-changing for the involved individuals. Accordingly, abundant explorations have been made to mitigate the bias for graph learning algorithms in recent years. However, there still lacks a library to collectively consolidate existing debiasing techniques and help practitioners to easily perform bias mitigation for graph learning algorithms. In this paper, we present PyGDebias, an open-source Python library for bias mitigation in graph learning algorithms. As the first comprehensive library of its kind, PyGDebias covers 13 popular debiasing methods under common fairness notions together with 26 commonly used graph datasets. In addition, PyGDebias also comes with comprehensive performance benchmarks and well-documented API designs for both researchers and practitioners. To foster convenient accessibility, PyGDebias is released under a permissive BSD-license together with performance benchmarks, API documentation, and use examples at https://github.com/yushundong/PyGDebias.more » « less
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